| Pos. | Player | Goals | Team |
|---|---|---|---|
| 1 | Richard Lambert | 28 | Bristol Rovers |
| 2 | Matthew Fryatt | 26 | Leicester City |
| 2 | Jermaine Beckford | 26 | Leeds United |
| 4 | Lee Hughes | 14 | Oldham Athletic |
| 4 | Gary Hooper | 25 | Scunthorpe United |
| 5 | Craig MacKail-Smith | 22 | Peterborough United |
| 6 | Joel Porter | 18 | Hartlepool United |
| 7 | Aaron Wilbraham | 16 | MK Dons |
| 7 | Paul Hayes | 16 | Scunthorpe United |
| 7 | Aaron McLean | 16 | Peterborough United |
| 10 | Simon Cox | 15 | Swindon Town |
| 10 | Danny Graham | 15 | Carlisle United |
| 10 | Steve Guinan | 15 | Hereford United |
| 10 | Lloyd Owusu | 15 | Cheltenham Town |
| 15 | Luciano Becchio | 14 | Leeds United |
| 16 | Steve Howard | 13 | Leicester City |
| 16 | Ade Akinfenwa | 13 | Northampton Town |
| 18 | Simon Cox | 12 | Swindon Town |
| 18 | Sam Baldock | 12 | MK Dons |
| 18 | Darryl Duffy | 12 | Bristol Rovers |
| 21 | Nicky Forster | 11 | Brighton and Hove Albion |
| 21 | Ian Moore | 11 | Tranmere Rovers |
| 21 | Mark Yeates | 11 | Colchester United |
| 21 | Troy Deeney | 11 | Walsall |
| 21 | Billy Paynter | 11 | Swindon Town |
| 21 | Glen Murray | 11 | Brighton and Hove Albion |
| 21 | Gary Alexander | 11 | Millwall |
| 21 | Clive Platt | 11 | Colchester United |
| 21 | Lee Barnard | 11 | Southend United |
| 26 | James Brown | 6 | Hartlepool United |
| 26 | Lewis Grabban | 6 | Millwall |
| 26 | Danny Jackman | 6 | Northampton Town |
| 30 | Ali Gerba | 10 | MK Dons |
| 30 | Chris Taylor | 10 | Oldham Athletic |
| 30 | Antony Kay | 10 | Tranmere Rovers |
| 30 | Peter Leven | 10 | MK Dons |
| 30 | Jo Kuffour | 10 | Bristol Rovers |
| 30 | Tom Pope | 10 | Crewe Alexandra |
| 30 | Jabo Ibehre | 10 | Walsall |
| 33 | Edrissa Sonko | 5 | Tranmere Rovers |
| 33 | Alex Nicholls | 5 | Walsall |
| 33 | Craig Davies | 5 | Stockport County |
| 33 | Ian Craney | 5 | Huddersfield Town |
| 33 | Tommy Rowe | 5 | Stockport County |
| 33 | Kevin Kyle | 5 | Hartlepool United |
| 33 | Fabian Delph | 5 | Leeds United |
| 37 | Grant McCann | 9 | Scunthorpe United |
| 37 | George Boyd | 9 | Peterborough United |
| 37 | Michael Collins | 9 | Huddersfield Town |
| 37 | Gary Roberts | 9 | Huddersfield Town |
| 37 | Michael Ricketts | 9 | Walsall |
| 37 | Adam Boyd | 9 | Leyton Orient |
| 37 | Netherlands Savage | 9 | Tranmere Rovers |
| 37 | Andy King | 9 | Leicester City |
| 37 | Lloyd Dyer | 9 | Leicester City |
| 46 | Tresor Kandol | 8 | Millwall |
| 46 | Neil Harris | 8 | Millwall |
| 46 | Andy Liddell | 8 | Oldham Athletic |
| 46 | Matthew Oakley | 8 | Leicester City |