Hearts faced a number of similar delays last season but avoided league sanctions by resolving the issue.
The SPL club attributed some of last term's delays to logistics transferring the funds from Lithuania, where majority shareholder Vladimir Romanov is based.
The Edinburgh club are ninth in the table are they suffered back-to-back defeats either side of the international break.
Manager John McGlynn said following Saturday's 2-0 defeat at St Mirren: "I don't think you could fault the players' work ethic and commitment, and the way we tried to play," he said.
"I thought we tried to play some great football. We're not doing a lot wrong but we're being punished for it."