The Dutchman is still struggling with the hamstring problem which prevented him playing in the matches against BATE Borisov and VfL Wolfsburg.
"It's a real shame he won't be in the team tomorrow," coach Jupp Heynckes said on Friday after Robben complained of pain during training.
"He was in outstanding form for 40 or 45 minutes and then he suddenly told me he was feeling the same pain in the same place."
Frenchman Franck Ribery is also doubtful for Bayern's game due to a calf muscle problem.
Bayern, who have won their first six games, will again be without striker Mario Gomez, recovering from ankle surgery, and David Alba, with a stress fracture.