| Rank | Dossard | Name | Country | Team | Points |
|---|---|---|---|---|---|
| MONÊTIER-LES-BAINS - km 57.5 | |||||
| 1 | 163 | Rémy DI GREGORIO | FDJ | 6 | |
| 2 | 158 | Peter VELITS | MRM | 4 | |
| 3 | 111 | Stefan SCHUMACHER | GST | 2 | |
| BOURG-D'OISANS - km 195.0 | |||||
| 1 | 145 | Jérôme PINEAU | BTL | 6 | |
| 2 | 158 | Peter VELITS | MRM | 4 | |
| 3 | 012 | Kurt-Asle ARVESEN | CSC | 2 | |
| ALPE-D'HUEZ - km 210.5 | |||||
| 1 | 011 | Carlos SASTRE | CSC | 20 | |
| 2 | 027 | Samuel SANCHEZ | EUS | 17 | |
| 3 | 016 | Andy SCHLECK | CSC | 15 | |
| 4 | 031 | Alejandro VALVERDE | GCE | 13 | |
| 5 | 017 | Frank SCHLECK | CSC | 12 | |
| 6 | 104 | Vladimir EFIMKIN | ALM | 10 | |
| 7 | 001 | Cadel EVANS | SIL | 9 | |
| 8 | 131 | Denis MENCHOV | RAB | 8 | |
| 9 | 191 | Christian VANDEVELDE | TSL | 7 | |
| 10 | 115 | Bernhard KOHL | GST | 6 | |
| 11 | 065 | Roman KREUZIGER | LIQ | 5 | |
| 12 | 109 | Tadej VALJAVEC | ALM | 4 | |
| 13 | 107 | Stephane GOUBERT | ALM | 3 | |
| 14 | 188 | David MONCOUTIE | COF | 2 | |
| 15 | 129 | Nicolas VOGONDY | AGR | 1 | |